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Recent Publications

By Department: Physics | Applied Math | Molecular and Cell Biology | Life & Environmental Sciences | Chemistry and Chemical Biology

Physics Publications


Sayantani Ghosh, co-author. Low-temperature energy transfer via self-trapped Excitons in Mn2+-Doped 2D Organometal Halide Perovskites. The Journal of Physical Chemistry Letters.

 

Maxime Theillard, Dustin Kleckner, and Shilpa Kahatri, co-authors. Retention of rising droplets in density stratification. Physical Review Fluids.

 

Chih-Chun Chien, co-author. Erratum: Dynamic process and Uhlmann process: incompatibility and dynamic phase of mixed quantum states. Physical Review B.

 

Daniel A. Beller, co-author. Fast, scalable, and interactive software for Landau-deGennes numerical modeling of nematic topological defects. Frontiers in Physics.

 

Linda S. Hirst and Sayantani Ghosh, co-authors. Directed assembly of magnetic and semiconducting nanoparticles with tunable and synergistic functionality. Scientific Reports.

 

Ajay Gopinathan, co-author. Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation. Nature Communications.

 

Sayantani Ghosh, co-author. Enhancing charge carrier delocalization in perovskite quantum dot solids with energetically aligned conjugated capping ligands. ACS Energy Letters.

 

Kinjal Dasbiswas, co-author. Mechanical force-driven registry of non-muscle myosin in fibroblasts. Biophysical Journal.


 

Applied Math Publications


Maxime Theillard, Dustin Kleckner, and Shilpa Kahatri, co-authors. Retention of rising droplets in density stratification. Physical Review Fluids.

 

Book Chapter: Boaz Ilan and Arnold D. Kim, co-authors. Radiative transfer of light in strongly scattering media. Springer Series in Light Scattering.

 

Camille Carvalho, co-author. A fully fourth order accurate energy stable finite difference method for Maxwell’s equations in metamaterials. IEEE Journal on Multiscale and Multiphysics Computational Techniques.


 

Molecular and Cell Biology Publications


Clarissa J. Nobile, co-author. Filamentous growth is a general feature of Candida auris clinical isolates. Medical Mycology.

 

Clarissa J. Nobile, co-author. Candida auris: Epidemiology, biology, antifungal resistance and virulence. PLOS Pathogens.

 

Clarissa J. Nobile and Aaron D. Hernday, co-authors. The Roles of Chromatin Accessibility in Regulating the Candida albicans White-Opaque Phenotypic Switch. Journal of Fungi.

 

Nestor Oviedo, co-author. Whole planarian chromosome squash. STAR Protocols.

 

Ramendra N. Saha, co-author. Merits and limitations in studying neuronal depolorization-dependent processes using elevated external potassium. American Society for Neurochemistry.

 

Rudy M. Ortiz, co-author. Prolonged fasting does not increase oxidative damage or inflammation in post weaned northern elephant seal pups. Journal of Experimental Biology.

 

Maria E. Zoghbi, co-author. Production of a human mitochondrial ABC transporter in E. Coli. Protein Expression and Purification.

 

Chris T. Amemiya, co-author. Generation of lamprey monoclonal antibodies (lampribodies) using the phage display system. Biomolecules.

 

Rudy M. Ortiz, co-author. Simultaneous angiotensin receptor blockade and glucagon-like peptide-1 receptor activation ameliorate albuminuria in obese insulin-resistant rats. Clinical and Experimental Pharmacology and Physiology.

 

David H. Ardell, co-author. tRNA functional signatures classify plastids as late-branching cyanobacteria. BMC Evolutionary Biology

 

Ramendra N. Saha, co-author. Certain ortho-hydroxylated brominated ethers are promiscuous kinase inhibitors that impair neuronal signaling and neurodevelopmental processes. Journal of Biological Chemistry.

 


 

Life & Environmental Sciences Publications


Jessica L. Blois, co-author. Occupancy models reveal regional differences in detectability and improve relative abundance estimations in fossil pollen assemblages. Quaternary Science Reviews.

 

Asmeret A. Berhe and Teamrat A. Ghezzehei, co-authors. Race and racism in soil science. European Journal of Social Science.

 

Danielle L. Edwards, co-author. Trait differences among discret morphs of a color polymorphic lizard, Podarcis erhardii. Peer J. Life & Environmental.

 

Asmeret A. Berhe and Teamrat A. Ghezzehei, co-authors. Towards diverse representation and inclusion in soil science in the United States. Social Science Society of America Journal.

 

Peggy A. O’Day, co-author. Effects of mercury, organic carbon, and microbial inhibition on methylmercury cycling at the profundal sediment-water interface of a sulfate-rich hypereutrophic reservoir. Environmental Pollution.

 

Justin D. Yeakel, co-author. Modern models of trophic meta-communities. Philosophical Transactions B.

 

Peggy A. O’Day, co-author. Iron speciation in particulate matter (PM2.5) from urban Los Angeles using spectro microscopy methods. Atmospheric Environment.

 

Stephen C. Hart, co-author. Montane meadows: A soil carbon sink or source? Ecosystems.

 

 

J. Michael Beaman and Michael N. Dawson, co-authors. Microbes and macro-invertebrates show parallel B-diversity but contrasting a-diversity patterns in a marine natural experiment. Proceedings of the Royal Society B.

 

J. Michael Beman, co-author. Climatic, physical and biogeochemical changes drive rapid oxygen loss and recovery in a marine ecosystem. Scientific Reports.

 

J. Michael Beman, co-author. Euphotic zone nitrification in the California current ecosystem. Limnology and Oceanography.

 

Jessica L. Blois, co-author. A protocol for differentiating late Quaternary leporids in southern California with remarks on Project 23 lagomorphs at Rancho La Brea, Los Angeles, California, USA. PaleoBios.

 

Stephan C. Hart, co-author. Climatic vulnerabilities and ecological preferences of soil invertebrates across biomes. Molecular Ecology.

 

Elizabeth R. Dumont, co-author. Intraspecific make combat behavior predicts morphology of cervical vertebrae in ruminant mammals. Proceeding of the Royal Society B.

 

Elizabeth R. Dumont, co-author. How moles walk; it’s all thumbs. Biology Letters.

 


 

Chemistry and Chemical Biology Publications


Liang Shi and Christine M. Isborn, co-authors. Vibronic and environmental effects in simulations of optical spectroscopy. Annual Review of Physical Chemistry.

 

Aurora Pribram Jones, co-author. New density-functional approximations and beyond: general discussion. Faraday Discussions.

 

Shahar Sukenik, co-author. Revealing hidden sensitivity of intrinsically disordered proteins to their chemical environment. The Journal of Physical Chemistry Letters.

 

Liang Shi and Christine M. Isborn, co-authors. The influence of electronic polarization on the sprectral density. Journal of Physical Chemistry B.

 

Aleksandr Noy, co-author. Antifouling strategies for protecting bioelectronic devices. APL Materials.

 

Aurora Pribram Jones, co-author. Challenges for large scale simulation: general discussion. Faraday Discussions.

 

Hrant P. Hratchian, co-author. Exceptionally complex electronic structures of lanthanide oxides and small molecules. Accounts of Chemical Research.

 

Book Chapter: Michelle Leslie, Christine M. Isborn, Erik Menke, Benjamin J. Stokes and Hrant P. Hratchian, co-authors. Aiming towards an effective Hispanic-serving chemistry curriculum. Growing Diverse STEM Communities: Methodology, Impact and Evidence.

 

Aleksandr Noy, co-author. A new type of artificial water channels. Nature Nanotechnology.

 

Aleksandr Noy, co-author. Strong electroosmotic coupling dominates ion conductance of 1.5 nm diameter carbon nanotube porins. ACS Nano.

 

Christine M. Isborn, co-author. Molecular dynamics simulations of alkaline earth metal ions binding to DNA reveal ion size and hydration effects. Physical Chemistry Chemical Physics.

 

Tao Ye, co-author. Simulation of subnanometer contrast in synamic atomic force microscopy of hydrophilic alkanethiol self-assembled monolayers in water. Langmuir.